n_sites | N_detections | rep_period | model_agg_M | iterations | burnin | thin | state_buffer |
---|---|---|---|---|---|---|---|
19 | 66 | 7 days | 300 | 350000 | 20000 | 20 | 2.5 |
model | description | WAIC |
---|---|---|
sc.fm2.2 | temp | 401.3381 |
sc.fm2.0 | lure | 402.6276 |
sc.fm3.1 | lure + pass | 403.1672 |
sc.fm4.0 | lure + snow + temp | 405.1243 |
sc.fm1 | dot model | 405.1430 |
sc.fm3.0 | lure + snow | 405.8577 |
sc.fm4.2 | lure + snow + temp + pass | 406.0668 |
sc.fm2.3 | pass | 406.8147 |
sc.fm5.1 | lure + snow + temp + pass + lure * snow | 407.5003 |
sc.fm5.0 | lure + snow + temp + pass + temp * snow | 408.0113 |
sc.fm2.1 | snow | 410.0576 |
cov | indicator_mean |
---|---|
psi.ind | 0.12731 |
beta.ind[1] | 0.00897 |
beta.ind[3] | 0.00497 |
beta.ind[2] | 0.00048 |
beta.ind[4] | 0.00000 |
beta.ind[5] | 0.00000 |
beta.ind[6] | 0.00000 |
cov | indicator_mean |
---|---|
psi.ind | 0.12769 |
beta.ind[1] | 0.00867 |
beta.ind[3] | 0.00564 |
beta.ind[4] | 0.00121 |
beta.ind[2] | 0.00048 |
beta.ind[5] | 0.00024 |
beta.ind[6] | 0.00018 |
cov | indicator_mean |
---|---|
psi.ind | 0.17000 |
beta.ind[1] | 0.01218 |
beta.ind[3] | 0.00636 |
beta.ind[2] | 0.00055 |
beta.ind[4] | 0.00000 |
dot model
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 561 | 109.797 | 58.592 | 16.00 | 216.00 | 0 |
D | 561 | 68.211 | 36.400 | 9.94 | 134.19 | 0 |
sigma | 796 | 0.296 | 0.263 | 0.16 | 0.43 | 0 |
lam0 | 4919 | 0.477 | 0.364 | 0.15 | 0.73 | 0 |
lure
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 614 | 124.925 | 66.574 | 24.00 | 240.00 | 0.00000 |
D | 614 | 77.609 | 41.358 | 14.29 | 148.48 | 0.00000 |
sigma | 889 | 0.298 | 0.258 | 0.17 | 0.43 | 0.00000 |
beta0.lam0 | 5693 | -1.299 | -1.283 | -1.99 | -0.61 | 0.02204 |
beta.lam0[1] | 15960 | -0.459 | -0.438 | -0.76 | -0.17 | 0.03856 |
snow
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 607 | 115.323 | 59.413 | 18.00 | 218.00 | 0.00000 |
D | 607 | 71.644 | 36.910 | 11.18 | 135.43 | 0.00000 |
sigma | 964 | 0.300 | 0.264 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 5338 | -1.066 | -1.045 | -1.76 | -0.42 | 0.04639 |
beta.lam0[1] | 16500 | -0.101 | -0.094 | -0.30 | 0.11 | 0.75012 |
temp
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 576 | 119.435 | 56.293 | 21.00 | 231.00 | 0.00000 |
D | 576 | 74.198 | 34.972 | 12.42 | 142.89 | 0.00000 |
sigma | 914 | 0.295 | 0.246 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 5148 | -1.087 | -1.077 | -1.80 | -0.45 | 0.04604 |
beta.lam0[1] | 16500 | 0.325 | 0.329 | 0.12 | 0.53 | 0.04525 |
pass
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 566 | 115.445 | 62.278 | 19.00 | 226.00 | 0.00000 |
D | 566 | 71.719 | 38.689 | 11.80 | 140.40 | 0.00000 |
sigma | 831 | 0.296 | 0.263 | 0.15 | 0.43 | 0.00000 |
beta0.lam0 | 4369 | -0.918 | -0.953 | -1.74 | -0.23 | 0.12595 |
beta.lam0[1] | 4030 | -0.107 | -0.418 | -1.54 | 1.14 | 0.92370 |
lure + snow
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 653 | 120.106 | 59.949 | 25.00 | 231.00 | 0.00000 |
D | 653 | 74.615 | 37.243 | 14.91 | 142.89 | 0.00000 |
sigma | 1051 | 0.301 | 0.267 | 0.17 | 0.43 | 0.00000 |
beta0.lam0 | 5938 | -1.304 | -1.275 | -2.00 | -0.63 | 0.02005 |
beta.lam0[1] | 16500 | -0.485 | -0.493 | -0.79 | -0.18 | 0.03294 |
beta.lam0[2] | 16500 | -0.136 | -0.111 | -0.35 | 0.06 | 0.60543 |
lure + pass
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 613 | 117.481 | 62.903 | 20.00 | 225.00 | 0.00000 |
D | 613 | 72.984 | 39.078 | 12.42 | 139.78 | 0.00000 |
sigma | 920 | 0.300 | 0.272 | 0.17 | 0.44 | 0.00000 |
beta0.lam0 | 3714 | -1.144 | -1.140 | -2.00 | -0.44 | 0.06244 |
beta.lam0[1] | 16500 | -0.457 | -0.436 | -0.76 | -0.16 | 0.04563 |
beta.lam0[2] | 6854 | -0.155 | -0.329 | -1.54 | 1.06 | 0.90125 |
lure + snow + temp
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 624 | 121.321 | 58.841 | 21.00 | 231.00 | 0.00000 |
D | 624 | 75.370 | 36.554 | 12.42 | 142.89 | 0.00000 |
sigma | 1014 | 0.299 | 0.265 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 5062 | -1.283 | -1.310 | -2.02 | -0.60 | 0.02599 |
beta.lam0[1] | 16500 | -0.375 | -0.390 | -0.70 | -0.05 | 0.17911 |
beta.lam0[2] | 16500 | -0.075 | -0.079 | -0.28 | 0.14 | 0.84627 |
beta.lam0[3] | 16500 | 0.213 | 0.194 | -0.02 | 0.44 | 0.32151 |
lure + snow + temp + pass
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 537 | 118.222 | 55.404 | 20.00 | 232.00 | 0.00000 |
D | 537 | 73.445 | 34.419 | 12.42 | 144.13 | 0.00000 |
sigma | 831 | 0.297 | 0.255 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 4284 | -1.131 | -1.166 | -1.96 | -0.37 | 0.08191 |
beta.lam0[1] | 16500 | -0.372 | -0.384 | -0.69 | -0.04 | 0.19236 |
beta.lam0[2] | 16500 | -0.075 | -0.065 | -0.29 | 0.13 | 0.84324 |
beta.lam0[3] | 16108 | 0.215 | 0.228 | -0.02 | 0.44 | 0.35261 |
beta.lam0[4] | 4485 | -0.140 | -0.322 | -1.50 | 1.13 | 0.88175 |
lure + snow + temp + pass + temp * snow
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 570 | 113.853 | 50.244 | 20.00 | 224.00 | 0.00000 |
D | 570 | 70.730 | 31.214 | 9.94 | 136.67 | 0.00000 |
sigma | 860 | 0.303 | 0.263 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 2986 | -1.117 | -1.096 | -1.97 | -0.36 | 0.08613 |
beta.lam0[1] | 16500 | -0.383 | -0.332 | -0.70 | -0.04 | 0.17699 |
beta.lam0[2] | 16500 | -0.105 | -0.117 | -0.32 | 0.11 | 0.80924 |
beta.lam0[3] | 16500 | 0.231 | 0.224 | -0.01 | 0.47 | 0.30448 |
beta.lam0[4] | 3488 | -0.128 | -0.237 | -1.56 | 1.16 | 0.92061 |
beta.lam0[5] | 16500 | 0.112 | 0.118 | -0.15 | 0.38 | 0.79313 |
lure + snow + temp + pass + lure * snow
## Warning: Identical densities found along different segments of the distribution,
## choosing rightmost.
param | n_effective | mean | mode | hdi_89pct_lower | hdi_89pct_upper | bayes_P |
---|---|---|---|---|---|---|
N | 565 | 118.475 | 75.077 | 19.00 | 230.00 | 0.00000 |
D | 565 | 73.602 | 46.641 | 11.80 | 142.89 | 0.00000 |
sigma | 869 | 0.298 | 0.248 | 0.16 | 0.43 | 0.00000 |
beta0.lam0 | 4399 | -1.211 | -1.200 | -2.03 | -0.46 | 0.05514 |
beta.lam0[1] | 15442 | -0.423 | -0.415 | -0.74 | -0.06 | 0.14569 |
beta.lam0[2] | 16500 | -0.277 | -0.234 | -0.64 | 0.08 | 0.54805 |
beta.lam0[3] | 17599 | 0.207 | 0.215 | -0.02 | 0.44 | 0.36511 |
beta.lam0[4] | 4698 | -0.134 | -0.386 | -1.53 | 1.13 | 0.91253 |
beta.lam0[5] | 16500 | -0.284 | -0.244 | -0.67 | 0.15 | 0.62168 |